Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929060.1_cds_XP_016476452.1_68281
CDS Infomation

[gene=LOC107798042] [db_xref=GeneID:107798042] [protein=uncharacterized protein LOC107798042] [protein_id=XP_016476452.1] [location=join(15077..15111,17042..17159,17354..17793,18093..18387,19294..20490)] [gbkey=CDS]
Sequence

ATGGCAAGTTCTGGGAAAGAAGATCAAGATCAAAGGAAAATCAATGGCATGGAAGATTCT
AAAACAACAATTGAATTTCTCCGGGCGAGATTATTGGCTGAAAGATCTGTATCACAAACA
GCAAGGCAGAGAGCTGATGAACTGTCACATAGGGTCTCAGAGCTCGAAGAGCAGTTAAAG
GCCGTGTCTCTACAAAGAAAGAAAGCTGAGAAGGCCACAGCAGCTGTTCTGTCCATATTA
GAGAACCATGGAATAAATGATGCTTCAGAGGAATTCAGTTCAGGCTCTGATCAGGAAACA
AGCTTATCCGACTCAAAAGATGCTGAAAATAAAAGAGAGGGAAGGGAAATTTCGTTAAGT
GTGAAAGAGAAAGAAGATGATGCGGAAACATTCTCAAGTTCCGAGATTACATCTTCTCCA
TCAACTGCCAGAAGTTTGTCGTGGAAAAGTGACAAAGGTTCTTCGCATTATTTGGACAGG
AGGAAATACACCGGTTCTAATAGGAGGAGATGTAACGTTGCACCGTCAACTGGCATCTCT
TCTTCAAAACGGGTTGGTAAATCATGCCGACGGATAAGGCGCAGGGATACCAGATCAGCT
AGTGATGAGTTACAAAATAGTTCTGCTGAATGTGCCTCTGAGGCTCGCCCAAGTTCTTCT
AACAATGGGCCTAAATCATTGACGGACGGTGCTGGTAACAGTGATGCAAATCAAGTGCAA
GTGACTGCATCAGGTGTGTCAATAAATGGAAGACGAGAAGATAAGAGTGATAAAGACATG
GAAAGAGCTTTAAATCAGCAAGCGCAACTTATAGGGCAATATGAAGCTGAGGAGAAAGCC
CAGAGAGAATGGGAAGAGAAGTACAGAGAGAGTAACAGCTATACACGGGATTCATGTGAC
CCTGGGAATTACTCGGACGTGACTGAAGAAAGAGATGACTTGAAGGCATCTCAGAAGCCA
TGCTTAGCTGGAAGAACCGGTAAGCAAAATCATGCAAACAAGTATGGAGCAGCCGATATT
CCTTCTACTGAGAAAAATGGAACTACAAACAGTTCTCCATCAACCCCACAAGTCAATATG
GGCTGCTTGGAAGATAAAAAAAGCAACAGGATAATTAAATCAGATTCCCCAGCATCAGAG
TTTGCACGTCCGATGTCTAATGGGAATTATTTAGAAAGTCACGGCCAGACACCTGCTTAT
AGTCACCGTCAGTCTTTTCCTGTGACTCGGTCCGCCATGCACCCCGGAGTATGCACTACC
TCGTATTCTGGAGATAGCAGTTTGCAAGCAGGACAAGGTTTTCAAAGAGGTTATGAACTT
GCCTTGGTGTCTCATAACACTTCGAATGTTGCAGGTTCTGTCCTGTGGGATCTCGAACAA
GCTAAACTTTCATTGAGTCAACAAATCAACAGCTCACCTCCATTAAGAGCTGGATCTTCT
ACCACGACCATGGAACATTCTATTCCTTCCACTAGAATTGAGGACAGGTCAGAGATTCCT
GCCCTTCTAAGACTGCCAACAGATTTTCAACTTGAAGCAACTACAACCGCCAGCTACCAG
GGATTGGCCTCGAGATTCAGTTCAGCAAACTATTTTCCTGAACCTACCACCTACAAATTC
TCTACGAGTCCTTACGTGGAGTCTCAATCAAATTCTATTACCGGAAACAGGTTTTCAACC
CTTTCCCCAAGACCTTACCCAGAGGTCTCTACTTCAGCTCCTTCATATAGGCCTATCTCT
GAGACTACCTTAGATACAGGCCTACCATCTTCAGTGAGATTTAATCCTAACTCGAGTTCA
CATGTTCCCTTCTCTAGTAAATTTACATACCCTACCTATCCCTCGTGCCCAGGTGTGGTG
CCAAATTTATCCTCAGGTGAAGTATTCTCAAGAAACCTTCCAAGAAATGAGACAGGTATA
CCGCCCTCATTTTCCTTTTCAACCTTGTGCCCAGATGTAGTGCCAAAATTTTCGTCAGGT
GAAGCGTTCTCGAGAAACTTTCCTAAGAATGAGAGAGGTATACCTCCCTCATTTTCCGTC
TCACGTTATGATACTCACATCAGACAAAATATGTATAGTAGTTGA

Peptide Sequence

PEP ID

XP_016476452.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107798042 [Nicotiana tabacum]
Sequence

MASSGKEDQDQRKINGMEDSKTTIEFLRARLLAERSVSQTARQRADELSHRVSELEEQLK
AVSLQRKKAEKATAAVLSILENHGINDASEEFSSGSDQETSLSDSKDAENKREGREISLS
VKEKEDDAETFSSSEITSSPSTARSLSWKSDKGSSHYLDRRKYTGSNRRRCNVAPSTGIS
SSKRVGKSCRRIRRRDTRSASDELQNSSAECASEARPSSSNNGPKSLTDGAGNSDANQVQ
VTASGVSINGRREDKSDKDMERALNQQAQLIGQYEAEEKAQREWEEKYRESNSYTRDSCD
PGNYSDVTEERDDLKASQKPCLAGRTGKQNHANKYGAADIPSTEKNGTTNSSPSTPQVNM
GCLEDKKSNRIIKSDSPASEFARPMSNGNYLESHGQTPAYSHRQSFPVTRSAMHPGVCTT
SYSGDSSLQAGQGFQRGYELALVSHNTSNVAGSVLWDLEQAKLSLSQQINSSPPLRAGSS
TTTMEHSIPSTRIEDRSEIPALLRLPTDFQLEATTTASYQGLASRFSSANYFPEPTTYKF
STSPYVESQSNSITGNRFSTLSPRPYPEVSTSAPSYRPISETTLDTGLPSSVRFNPNSSS
HVPFSSKFTYPTYPSCPGVVPNLSSGEVFSRNLPRNETGIPPSFSFSTLCPDVVPKFSSG
EAFSRNFPKNERGIPPSFSVSRYDTHIRQNMYSS

Transcript Sequence

Gene sequence data has not been registered.